Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scn1aA2APX8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Scn1aA2APX8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.58□□□□□ -0.08
Scn1aA2APX8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Scn1aA2APX8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Scn1aA2APX8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm12403-201ENSMUST00000121384 959 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Mir698-201ENSMUST00000102164 109 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm5356-201ENSMUST00000093326 615 ntBASIC14.56□□□□□ -0.08
Scn1aA2APX8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn1aA2APX8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.55□□□□□ -0.08
Scn1aA2APX8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms