Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav12d-1A0N8R0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gm6973-201ENSMUST00000117080 721 ntBASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gm18737-201ENSMUST00000173594 937 ntBASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Rpph1-201ENSMUST00000175096 319 ntBASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gm17968-201ENSMUST00000194902 784 ntBASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav12d-1A0N8R0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Grk6-205ENSMUST00000224653 2976 ntBASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav12d-1A0N8R0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav12d-1A0N8R0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms