Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.76□□□□□ -0.69
PdfS4R2K0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
PdfS4R2K0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
PdfS4R2K0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.76□□□□□ -0.69
PdfS4R2K0 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.76□□□□□ -0.69
PdfS4R2K0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PdfS4R2K0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Grk6-205ENSMUST00000224653 2976 ntBASIC10.75□□□□□ -0.69
PdfS4R2K0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Gm18489-201ENSMUST00000172565 551 ntBASIC10.75□□□□□ -0.69
PdfS4R2K0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.75□□□□□ -0.69
PdfS4R2K0 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.75□□□□□ -0.69
PdfS4R2K0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.75□□□□□ -0.69
PdfS4R2K0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.75□□□□□ -0.69
PdfS4R2K0 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.75□□□□□ -0.69
PdfS4R2K0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
PdfS4R2K0 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.75□□□□□ -0.69
PdfS4R2K0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PdfS4R2K0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
PdfS4R2K0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PdfS4R2K0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms