Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Gm27680-201ENSMUST00000184192 160 ntBASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdc45Q9Z1X9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdc45Q9Z1X9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Gm15920-201ENSMUST00000118998 402 ntBASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Gm27321-201ENSMUST00000185021 205 ntBASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdc45Q9Z1X9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdc45Q9Z1X9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms