Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chaf1aQ9QWF0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Gm8584-201ENSMUST00000171982 758 ntBASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chaf1aQ9QWF0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chaf1aQ9QWF0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chaf1aQ9QWF0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chaf1aQ9QWF0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Mir3113-201ENSMUST00000175478 76 ntBASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chaf1aQ9QWF0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.69■□□□□ 0.1
Chaf1aQ9QWF0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms