Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Gm12441-201ENSMUST00000121806 588 ntBASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Gm19164-201ENSMUST00000210667 640 ntBASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Smco4Q9JIS3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smco4Q9JIS3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Gm7977-201ENSMUST00000193787 748 ntBASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco4Q9JIS3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Mir1668-201ENSMUST00000184114 107 ntBASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gm8495-201ENSMUST00000188740 694 ntBASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gm9987-201ENSMUST00000069768 567 ntBASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco4Q9JIS3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms