Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl28Q9JIL2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm27525-201ENSMUST00000184465 107 ntBASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm5264-201ENSMUST00000190584 848 ntBASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccl28Q9JIL2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccl28Q9JIL2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms