Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm11424-201ENSMUST00000121929 829 ntBASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Mir7654-201ENSMUST00000185082 70 ntBASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Gm6745-201ENSMUST00000199216 526 ntBASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.63■□□□□ 0.25
Ube3bQ9ES34 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube3bQ9ES34 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Gm12091-201ENSMUST00000146791 830 ntBASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Gm9908-201ENSMUST00000211534 448 ntBASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ube3bQ9ES34 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Gm11524-201ENSMUST00000119349 807 ntBASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Gm11434-201ENSMUST00000122379 629 ntBASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Gm5745-201ENSMUST00000183748 313 ntBASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ube3bQ9ES34 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ube3bQ9ES34 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms