Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Gm45747-201ENSMUST00000212203 999 ntBASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn3Q9DCB1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn3Q9DCB1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Gm28033-201ENSMUST00000184224 96 ntBASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn3Q9DCB1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn3Q9DCB1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn3Q9DCB1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn3Q9DCB1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn3Q9DCB1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn3Q9DCB1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn3Q9DCB1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn3Q9DCB1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn3Q9DCB1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn3Q9DCB1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmgn3Q9DCB1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn3Q9DCB1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms