Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps28Q9D1C8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps28Q9D1C8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gm15460-201ENSMUST00000118147 391 ntBASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.37□□□□□ -0.11
Vps28Q9D1C8 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Syt7-204ENSMUST00000223586 1344 ntBASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vps28Q9D1C8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Gm16215-201ENSMUST00000161990 637 ntBASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps28Q9D1C8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps28Q9D1C8 Gm15393-201ENSMUST00000120499 219 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms