Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.27□□□□□ -0.13
Cldnd1Q9CQX5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Gm9368-201ENSMUST00000219348 831 ntBASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Itm2b-204ENSMUST00000228637 783 ntBASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cldnd1Q9CQX5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Gm43133-201ENSMUST00000197472 463 ntBASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Gm10268-201ENSMUST00000085340 555 ntBASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.25□□□□□ -0.13
Cldnd1Q9CQX5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gm11793-201ENSMUST00000120433 981 ntBASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gm3786-201ENSMUST00000202659 378 ntBASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gm6334-201ENSMUST00000207083 228 ntBASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldnd1Q9CQX5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldnd1Q9CQX5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms