Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdk9Q99J95 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.15□□□□□ -0.15
Cdk9Q99J95 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Cdk9Q99J95 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 AV026068-213ENSMUST00000223675 1171 ntBASIC14.14□□□□□ -0.15
Cdk9Q99J95 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.14□□□□□ -0.15
Cdk9Q99J95 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdk9Q99J95 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.13□□□□□ -0.15
Cdk9Q99J95 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdk9Q99J95 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.13□□□□□ -0.15
Cdk9Q99J95 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.13□□□□□ -0.15
Cdk9Q99J95 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdk9Q99J95 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk9Q99J95 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms