Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Gm9396-201ENSMUST00000076703 567 ntBASIC16.2■□□□□ 0.18
Smc1bQ920F6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.2■□□□□ 0.18
Smc1bQ920F6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc1bQ920F6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.19■□□□□ 0.18
Smc1bQ920F6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.19■□□□□ 0.18
Smc1bQ920F6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Gm5035-201ENSMUST00000215581 927 ntBASIC16.19■□□□□ 0.18
Smc1bQ920F6 Gm19220-201ENSMUST00000222682 803 ntBASIC16.19■□□□□ 0.18
Smc1bQ920F6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smc1bQ920F6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc1bQ920F6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Carlr-201ENSMUST00000181515 2574 ntBASIC16.18■□□□□ 0.18
Smc1bQ920F6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc1bQ920F6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Gm4984-201ENSMUST00000115987 360 ntBASIC16.17■□□□□ 0.18
Smc1bQ920F6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.17■□□□□ 0.18
Smc1bQ920F6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.17■□□□□ 0.18
Smc1bQ920F6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc1bQ920F6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc1bQ920F6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Smc1bQ920F6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms