Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf8Q8VC56 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm25287-201ENSMUST00000103846 110 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm22918-201ENSMUST00000103855 110 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm6973-201ENSMUST00000117080 721 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm2451-201ENSMUST00000199447 999 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm10290-201ENSMUST00000200451 999 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.54□□□□□ -0.24
Rnf8Q8VC56 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Gm18889-201ENSMUST00000174284 929 ntBASIC13.53□□□□□ -0.24
Rnf8Q8VC56 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf8Q8VC56 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rnf8Q8VC56 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms