Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Gm13829-201ENSMUST00000119600 138 ntBASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cuedc1Q8R3V6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm8602-201ENSMUST00000184045 607 ntBASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cuedc1Q8R3V6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Gm22189-201ENSMUST00000103822 86 ntBASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Gm4875-201ENSMUST00000118257 786 ntBASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Gm14042-201ENSMUST00000120139 833 ntBASIC12.81□□□□□ -0.36
Cuedc1Q8R3V6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms