Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Dupd1-202ENSMUST00000224735 548 ntBASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Gm12428-201ENSMUST00000119844 727 ntBASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rfwd3Q8CIK8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.21□□□□□ -0.3
Rfwd3Q8CIK8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Gm15957-201ENSMUST00000118893 974 ntBASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Gm15653-201ENSMUST00000119247 907 ntBASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 AA543401-201ENSMUST00000164248 1269 ntBASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Shd-206ENSMUST00000225145 998 ntBASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Mir125a-201ENSMUST00000083545 68 ntBASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rfwd3Q8CIK8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rfwd3Q8CIK8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms