Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm44719-201ENSMUST00000206404 149 ntBASIC16.33■□□□□ 0.2
Alx1Q8C8B0 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Alx1Q8C8B0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Alx1Q8C8B0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Alx1Q8C8B0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Gm43094-201ENSMUST00000196549 921 ntBASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Alx1Q8C8B0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms