Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cpne3Q8BT60 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Gm5264-201ENSMUST00000190584 848 ntBASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Gm18057-201ENSMUST00000208220 503 ntBASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cpne3Q8BT60 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Gm11745-201ENSMUST00000121669 448 ntBASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Gm8000-201ENSMUST00000188378 592 ntBASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.54□□□□□ -0.24
Cpne3Q8BT60 AW822252-206ENSMUST00000208904 237 ntBASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Gm10175-201ENSMUST00000086013 645 ntBASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cpne3Q8BT60 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cpne3Q8BT60 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms