Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdhr3Q8BL00 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Cdhr3Q8BL00 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Gm15957-201ENSMUST00000118893 974 ntBASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Gm44608-201ENSMUST00000206827 855 ntBASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdhr3Q8BL00 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdhr3Q8BL00 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms