Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Gm6415-201ENSMUST00000118488 348 ntBASIC13.67□□□□□ -0.22
Scn4bQ7M729 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.67□□□□□ -0.22
Scn4bQ7M729 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.67□□□□□ -0.22
Scn4bQ7M729 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn4bQ7M729 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.66□□□□□ -0.22
Scn4bQ7M729 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Gm27430-201ENSMUST00000184585 107 ntBASIC13.66□□□□□ -0.22
Scn4bQ7M729 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.66□□□□□ -0.22
Scn4bQ7M729 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Gm44333-201ENSMUST00000197168 107 ntBASIC13.66□□□□□ -0.22
Scn4bQ7M729 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Dupd1-202ENSMUST00000224735 548 ntBASIC13.66□□□□□ -0.22
Scn4bQ7M729 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.66□□□□□ -0.22
Scn4bQ7M729 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn4bQ7M729 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.65□□□□□ -0.22
Scn4bQ7M729 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Gm8410-201ENSMUST00000117225 605 ntBASIC13.65□□□□□ -0.22
Scn4bQ7M729 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.65□□□□□ -0.22
Scn4bQ7M729 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn4bQ7M729 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Scn4bQ7M729 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.65□□□□□ -0.22
Scn4bQ7M729 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn4bQ7M729 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms