Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb4Q6P8W9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb4Q6P8W9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Hmgb4Q6P8W9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb4Q6P8W9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Hmgb4Q6P8W9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb4Q6P8W9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.71□□□□□ -0.06
Hmgb4Q6P8W9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgb4Q6P8W9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Hmgb4Q6P8W9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Gm6180-201ENSMUST00000065243 498 ntBASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb4Q6P8W9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Gm22189-201ENSMUST00000103822 86 ntBASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Gm6912-201ENSMUST00000117218 544 ntBASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Gm10766-202ENSMUST00000194123 606 ntBASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 AA619741-201ENSMUST00000195095 646 ntBASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hmgb4Q6P8W9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Gm12138-201ENSMUST00000122180 951 ntBASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Gm28760-201ENSMUST00000185995 736 ntBASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Gm8515-201ENSMUST00000194852 576 ntBASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Gm9797-201ENSMUST00000052902 613 ntBASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmgb4Q6P8W9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms