Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.6□□□□□ -0.07
Smarcd1Q61466 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Gm28631-201ENSMUST00000190740 334 ntBASIC14.59□□□□□ -0.07
Smarcd1Q61466 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Gm18905-201ENSMUST00000205454 928 ntBASIC14.59□□□□□ -0.07
Smarcd1Q61466 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.59□□□□□ -0.07
Smarcd1Q61466 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcd1Q61466 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcd1Q61466 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcd1Q61466 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcd1Q61466 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcd1Q61466 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Smarcd1Q61466 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Gm19220-201ENSMUST00000222682 803 ntBASIC14.58□□□□□ -0.08
Smarcd1Q61466 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.58□□□□□ -0.08
Smarcd1Q61466 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Smarcd1Q61466 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Gm24420-201ENSMUST00000176676 59 ntBASIC14.57□□□□□ -0.08
Smarcd1Q61466 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.57□□□□□ -0.08
Smarcd1Q61466 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smarcd1Q61466 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms