Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Gm14028-201ENSMUST00000117434 479 ntBASIC15.38■□□□□ 0.05
Col11a1Q61245 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.38■□□□□ 0.05
Col11a1Q61245 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col11a1Q61245 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.38■□□□□ 0.05
Col11a1Q61245 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.38■□□□□ 0.05
Col11a1Q61245 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col11a1Q61245 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col11a1Q61245 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Col11a1Q61245 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Col11a1Q61245 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Col11a1Q61245 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col11a1Q61245 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col11a1Q61245 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.36■□□□□ 0.05
Col11a1Q61245 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Col11a1Q61245 Mir5120-201ENSMUST00000175020 78 ntBASIC15.36■□□□□ 0.05
Col11a1Q61245 Gm4768-201ENSMUST00000206199 686 ntBASIC15.36■□□□□ 0.05
Col11a1Q61245 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col11a1Q61245 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.36■□□□□ 0.05
Col11a1Q61245 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Gm14130-201ENSMUST00000118417 987 ntBASIC15.36■□□□□ 0.05
Col11a1Q61245 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.36■□□□□ 0.05
Col11a1Q61245 Mospd4-201ENSMUST00000180618 576 ntBASIC15.36■□□□□ 0.05
Col11a1Q61245 Mir6979-201ENSMUST00000183927 56 ntBASIC15.36■□□□□ 0.05
Col11a1Q61245 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC15.36■□□□□ 0.05
Col11a1Q61245 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col11a1Q61245 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col11a1Q61245 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.36■□□□□ 0.05
Col11a1Q61245 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Col11a1Q61245 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Col11a1Q61245 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.35■□□□□ 0.05
Col11a1Q61245 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Gm12217-201ENSMUST00000118858 696 ntBASIC15.35■□□□□ 0.05
Col11a1Q61245 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.35■□□□□ 0.05
Col11a1Q61245 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.35■□□□□ 0.05
Col11a1Q61245 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col11a1Q61245 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.35■□□□□ 0.05
Col11a1Q61245 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms