Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Gm12882-201ENSMUST00000121696 517 ntBASIC13.36□□□□□ -0.27
Nr1h4Q60641 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.36□□□□□ -0.27
Nr1h4Q60641 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nr1h4Q60641 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Gm9385-201ENSMUST00000117563 472 ntBASIC13.35□□□□□ -0.27
Nr1h4Q60641 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.35□□□□□ -0.27
Nr1h4Q60641 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.35□□□□□ -0.27
Nr1h4Q60641 Gm15483-201ENSMUST00000120338 456 ntBASIC13.35□□□□□ -0.27
Nr1h4Q60641 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.35□□□□□ -0.27
Nr1h4Q60641 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.35□□□□□ -0.27
Nr1h4Q60641 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.35□□□□□ -0.27
Nr1h4Q60641 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nr1h4Q60641 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.34□□□□□ -0.27
Nr1h4Q60641 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Gm27920-201ENSMUST00000183953 96 ntBASIC13.34□□□□□ -0.27
Nr1h4Q60641 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.34□□□□□ -0.27
Nr1h4Q60641 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.34□□□□□ -0.27
Nr1h4Q60641 Gm7461-201ENSMUST00000058918 827 ntBASIC13.34□□□□□ -0.27
Nr1h4Q60641 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Nr1h4Q60641 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms