Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Spire1Q52KF3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
Spire1Q52KF3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Gm13689-201ENSMUST00000119360 685 ntBASIC14.25□□□□□ -0.13
Spire1Q52KF3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.25□□□□□ -0.13
Spire1Q52KF3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.25□□□□□ -0.13
Spire1Q52KF3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.25□□□□□ -0.13
Spire1Q52KF3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Spire1Q52KF3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.24□□□□□ -0.13
Spire1Q52KF3 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.24□□□□□ -0.13
Spire1Q52KF3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.24□□□□□ -0.13
Spire1Q52KF3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spire1Q52KF3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm12742-201ENSMUST00000117326 410 ntBASIC14.23□□□□□ -0.13
Spire1Q52KF3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm27847-201ENSMUST00000183711 107 ntBASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm27375-201ENSMUST00000183799 107 ntBASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm7561-201ENSMUST00000211203 886 ntBASIC14.23□□□□□ -0.13
Spire1Q52KF3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.23□□□□□ -0.13
Spire1Q52KF3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spire1Q52KF3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spire1Q52KF3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spire1Q52KF3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Spire1Q52KF3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spire1Q52KF3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms