Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa3Q3UPR0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Shisa3Q3UPR0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa3Q3UPR0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa3Q3UPR0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.14□□□□□ -0.47
Shisa3Q3UPR0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa3Q3UPR0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Mir3113-201ENSMUST00000175478 76 ntBASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Mir8117-201ENSMUST00000184773 107 ntBASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Gm37230-201ENSMUST00000194491 818 ntBASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa3Q3UPR0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa3Q3UPR0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms