Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.22□□□□□ -0.13
Ebf1Q07802 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf1Q07802 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.21□□□□□ -0.13
Ebf1Q07802 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ebf1Q07802 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.21□□□□□ -0.13
Ebf1Q07802 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.21□□□□□ -0.13
Ebf1Q07802 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ebf1Q07802 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf1Q07802 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ebf1Q07802 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf1Q07802 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf1Q07802 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf1Q07802 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf1Q07802 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf1Q07802 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ebf1Q07802 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm10275-202ENSMUST00000168697 495 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 AY702102-202ENSMUST00000194651 1173 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm5035-201ENSMUST00000215581 927 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm10275-201ENSMUST00000092620 635 ntBASIC14.2□□□□□ -0.14
Ebf1Q07802 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ebf1Q07802 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf1Q07802 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ebf1Q07802 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.19□□□□□ -0.14
Ebf1Q07802 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.19□□□□□ -0.14
Ebf1Q07802 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.19□□□□□ -0.14
Ebf1Q07802 Gm28911-201ENSMUST00000188837 117 ntBASIC14.19□□□□□ -0.14
Ebf1Q07802 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ebf1Q07802 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.19□□□□□ -0.14
Ebf1Q07802 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.19□□□□□ -0.14
Ebf1Q07802 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.19□□□□□ -0.14
Ebf1Q07802 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf1Q07802 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.19□□□□□ -0.14
Ebf1Q07802 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms