Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm27301-201ENSMUST00000184012 127 ntBASIC12.03□□□□□ -0.48
Smn1P97801 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.03□□□□□ -0.48
Smn1P97801 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.03□□□□□ -0.48
Smn1P97801 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.03□□□□□ -0.48
Smn1P97801 Gm10275-201ENSMUST00000092620 635 ntBASIC12.03□□□□□ -0.48
Smn1P97801 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Smn1P97801 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smn1P97801 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.03□□□□□ -0.48
Smn1P97801 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smn1P97801 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smn1P97801 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smn1P97801 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smn1P97801 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smn1P97801 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smn1P97801 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Smn1P97801 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Smn1P97801 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Smn1P97801 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Smn1P97801 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.02□□□□□ -0.49
Smn1P97801 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Smn1P97801 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.02□□□□□ -0.49
Smn1P97801 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.02□□□□□ -0.49
Smn1P97801 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.02□□□□□ -0.49
Smn1P97801 Gm5177-201ENSMUST00000183092 997 ntBASIC12.02□□□□□ -0.49
Smn1P97801 Mir8098-201ENSMUST00000184011 137 ntBASIC12.02□□□□□ -0.49
Smn1P97801 Gm5864-201ENSMUST00000202263 970 ntBASIC12.02□□□□□ -0.49
Smn1P97801 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.02□□□□□ -0.49
Smn1P97801 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Smn1P97801 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.02□□□□□ -0.49
Smn1P97801 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Smn1P97801 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Smn1P97801 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Smn1P97801 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Gm9385-201ENSMUST00000117563 472 ntBASIC12.01□□□□□ -0.49
Smn1P97801 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.01□□□□□ -0.49
Smn1P97801 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Mir5131-201ENSMUST00000175426 93 ntBASIC12.01□□□□□ -0.49
Smn1P97801 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Smn1P97801 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.01□□□□□ -0.49
Smn1P97801 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smn1P97801 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smn1P97801 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms