Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Gm21470-201ENSMUST00000187680 696 ntBASIC14.22□□□□□ -0.13
Cdh6P97326 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdh6P97326 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdh6P97326 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.22□□□□□ -0.13
Cdh6P97326 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdh6P97326 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh6P97326 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdh6P97326 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Gm12585-201ENSMUST00000117307 290 ntBASIC14.21□□□□□ -0.13
Cdh6P97326 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.21□□□□□ -0.13
Cdh6P97326 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdh6P97326 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdh6P97326 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdh6P97326 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdh6P97326 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.21□□□□□ -0.13
Cdh6P97326 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdh6P97326 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh6P97326 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh6P97326 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh6P97326 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh6P97326 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdh6P97326 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh6P97326 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh6P97326 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh6P97326 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdh6P97326 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh6P97326 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.2□□□□□ -0.14
Cdh6P97326 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Cdh6P97326 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.2□□□□□ -0.14
Cdh6P97326 Mir7023-201ENSMUST00000185093 64 ntBASIC14.2□□□□□ -0.14
Cdh6P97326 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cdh6P97326 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.2□□□□□ -0.14
Cdh6P97326 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh6P97326 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cdh6P97326 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh6P97326 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms