Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RoraP51448 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
RoraP51448 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RoraP51448 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.27□□□□□ -0.28
RoraP51448 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
RoraP51448 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.27□□□□□ -0.29
RoraP51448 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Gm12490-201ENSMUST00000120255 560 ntBASIC13.27□□□□□ -0.29
RoraP51448 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.27□□□□□ -0.29
RoraP51448 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.27□□□□□ -0.29
RoraP51448 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.27□□□□□ -0.29
RoraP51448 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.27□□□□□ -0.29
RoraP51448 Gm44608-201ENSMUST00000206827 855 ntBASIC13.27□□□□□ -0.29
RoraP51448 Gm7653-201ENSMUST00000214567 508 ntBASIC13.27□□□□□ -0.29
RoraP51448 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.27□□□□□ -0.29
RoraP51448 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.27□□□□□ -0.29
RoraP51448 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.27□□□□□ -0.29
RoraP51448 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RoraP51448 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RoraP51448 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RoraP51448 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RoraP51448 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RoraP51448 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.26□□□□□ -0.29
RoraP51448 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.26□□□□□ -0.29
RoraP51448 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RoraP51448 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RoraP51448 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.26□□□□□ -0.29
RoraP51448 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.26□□□□□ -0.29
RoraP51448 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.26□□□□□ -0.29
RoraP51448 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
RoraP51448 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RoraP51448 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RoraP51448 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RoraP51448 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RoraP51448 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RoraP51448 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RoraP51448 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RoraP51448 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RoraP51448 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
RoraP51448 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RoraP51448 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
RoraP51448 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms