Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.63□□□□□ -0.55
Nkx2-1P50220 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.63□□□□□ -0.55
Nkx2-1P50220 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.63□□□□□ -0.55
Nkx2-1P50220 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.63□□□□□ -0.55
Nkx2-1P50220 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx2-1P50220 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.62□□□□□ -0.55
Nkx2-1P50220 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.62□□□□□ -0.55
Nkx2-1P50220 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.62□□□□□ -0.55
Nkx2-1P50220 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.62□□□□□ -0.55
Nkx2-1P50220 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx2-1P50220 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx2-1P50220 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 Gm25925-201ENSMUST00000158314 306 ntBASIC11.61□□□□□ -0.55
Nkx2-1P50220 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx2-1P50220 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms