Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cd40lgP27548 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.96□□□□□ -0.33
Cd40lgP27548 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cd40lgP27548 Gm15693-201ENSMUST00000120470 637 ntBASIC12.96□□□□□ -0.33
Cd40lgP27548 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Gm25144-201ENSMUST00000179561 110 ntBASIC12.96□□□□□ -0.33
Cd40lgP27548 Gm25352-201ENSMUST00000179815 110 ntBASIC12.96□□□□□ -0.33
Cd40lgP27548 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Gm17837-201ENSMUST00000186435 985 ntBASIC12.96□□□□□ -0.33
Cd40lgP27548 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cd40lgP27548 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cd40lgP27548 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cd40lgP27548 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cd40lgP27548 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cd40lgP27548 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cd40lgP27548 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cd40lgP27548 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cd40lgP27548 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Cd40lgP27548 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Cd40lgP27548 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cd40lgP27548 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cd40lgP27548 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cd40lgP27548 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cd40lgP27548 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.96□□□□□ -0.34
Cd40lgP27548 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.96□□□□□ -0.34
Cd40lgP27548 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.95□□□□□ -0.34
Cd40lgP27548 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Gm6222-201ENSMUST00000120787 396 ntBASIC12.95□□□□□ -0.34
Cd40lgP27548 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cd40lgP27548 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cd40lgP27548 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm13015-201ENSMUST00000118674 204 ntBASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm14042-201ENSMUST00000120139 833 ntBASIC12.94□□□□□ -0.34
Cd40lgP27548 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm9719-201ENSMUST00000162765 543 ntBASIC12.94□□□□□ -0.34
Cd40lgP27548 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms