Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Cbx3P23198 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm8825-201ENSMUST00000182565 998 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm4518-201ENSMUST00000182638 718 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.77□□□□□ -0.37
Cbx3P23198 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cbx3P23198 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cbx3P23198 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.77□□□□□ -0.37
Cbx3P23198 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.77□□□□□ -0.37
Cbx3P23198 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cbx3P23198 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cbx3P23198 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.76□□□□□ -0.37
Cbx3P23198 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.76□□□□□ -0.37
Cbx3P23198 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.76□□□□□ -0.37
Cbx3P23198 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Gm15794-201ENSMUST00000120182 631 ntBASIC12.76□□□□□ -0.37
Cbx3P23198 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.76□□□□□ -0.37
Cbx3P23198 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.76□□□□□ -0.37
Cbx3P23198 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.76□□□□□ -0.37
Cbx3P23198 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cbx3P23198 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.76□□□□□ -0.37
Cbx3P23198 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.76□□□□□ -0.37
Cbx3P23198 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cbx3P23198 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cbx3P23198 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.75□□□□□ -0.37
Cbx3P23198 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cbx3P23198 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cbx3P23198 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Mir3081-201ENSMUST00000175305 84 ntBASIC12.75□□□□□ -0.37
Cbx3P23198 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cbx3P23198 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.75□□□□□ -0.37
Cbx3P23198 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms