Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VimP20152 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
VimP20152 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.23□□□□□ -0.13
VimP20152 Gm2451-201ENSMUST00000199447 999 ntBASIC14.23□□□□□ -0.13
VimP20152 Gm10290-201ENSMUST00000200451 999 ntBASIC14.23□□□□□ -0.13
VimP20152 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VimP20152 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.23□□□□□ -0.13
VimP20152 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VimP20152 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.23□□□□□ -0.13
VimP20152 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VimP20152 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
VimP20152 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VimP20152 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
VimP20152 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VimP20152 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.22□□□□□ -0.13
VimP20152 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.22□□□□□ -0.13
VimP20152 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VimP20152 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VimP20152 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VimP20152 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VimP20152 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VimP20152 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.21□□□□□ -0.13
VimP20152 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VimP20152 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VimP20152 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VimP20152 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.21□□□□□ -0.13
VimP20152 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VimP20152 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VimP20152 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.21□□□□□ -0.13
VimP20152 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VimP20152 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VimP20152 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VimP20152 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.21□□□□□ -0.13
VimP20152 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
VimP20152 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VimP20152 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
VimP20152 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VimP20152 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
VimP20152 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
VimP20152 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VimP20152 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
VimP20152 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.2□□□□□ -0.14
VimP20152 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.2□□□□□ -0.14
VimP20152 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.2□□□□□ -0.14
VimP20152 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VimP20152 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VimP20152 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.2□□□□□ -0.14
VimP20152 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.2□□□□□ -0.14
VimP20152 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.2□□□□□ -0.14
VimP20152 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
VimP20152 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VimP20152 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VimP20152 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms