Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hmgn1P18608 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmgn1P18608 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Hmgn1P18608 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Hmgn1P18608 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hmgn1P18608 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Hmgn1P18608 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hmgn1P18608 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.83□□□□□ -0.36
Hmgn1P18608 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmgn1P18608 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Gm15957-201ENSMUST00000118893 974 ntBASIC12.82□□□□□ -0.36
Hmgn1P18608 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.82□□□□□ -0.36
Hmgn1P18608 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.82□□□□□ -0.36
Hmgn1P18608 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.82□□□□□ -0.36
Hmgn1P18608 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgn1P18608 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn1P18608 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn1P18608 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.81□□□□□ -0.36
Hmgn1P18608 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.81□□□□□ -0.36
Hmgn1P18608 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn1P18608 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn1P18608 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn1P18608 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.8□□□□□ -0.36
Hmgn1P18608 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn1P18608 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms