Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Ccl1P10146 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Ccl1P10146 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.86□□□□□ -0.67
Ccl1P10146 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ccl1P10146 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.86□□□□□ -0.67
Ccl1P10146 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.86□□□□□ -0.67
Ccl1P10146 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.86□□□□□ -0.67
Ccl1P10146 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.86□□□□□ -0.67
Ccl1P10146 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.86□□□□□ -0.67
Ccl1P10146 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Ccl1P10146 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ccl1P10146 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ccl1P10146 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ccl1P10146 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ccl1P10146 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccl1P10146 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Ccl1P10146 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Ccl1P10146 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.85□□□□□ -0.67
Ccl1P10146 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Ccl1P10146 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccl1P10146 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.85□□□□□ -0.67
Ccl1P10146 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Ccl1P10146 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl1P10146 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Gm7787-201ENSMUST00000216858 688 ntBASIC10.85□□□□□ -0.67
Ccl1P10146 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.85□□□□□ -0.67
Ccl1P10146 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.85□□□□□ -0.67
Ccl1P10146 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.85□□□□□ -0.67
Ccl1P10146 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.85□□□□□ -0.67
Ccl1P10146 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.85□□□□□ -0.67
Ccl1P10146 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Ccl1P10146 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ccl1P10146 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccl1P10146 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Ccl1P10146 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccl1P10146 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccl1P10146 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccl1P10146 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms