Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxc8P09025 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc8P09025 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hoxc8P09025 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Hoxc8P09025 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Hoxc8P09025 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.8□□□□□ -0.04
Hoxc8P09025 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.8□□□□□ -0.04
Hoxc8P09025 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.8□□□□□ -0.04
Hoxc8P09025 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.8□□□□□ -0.04
Hoxc8P09025 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hoxc8P09025 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
Hoxc8P09025 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxc8P09025 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxc8P09025 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.8□□□□□ -0.04
Hoxc8P09025 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc8P09025 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxc8P09025 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Hoxc8P09025 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.79□□□□□ -0.04
Hoxc8P09025 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.79□□□□□ -0.04
Hoxc8P09025 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxc8P09025 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxc8P09025 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxc8P09025 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.79□□□□□ -0.04
Hoxc8P09025 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.79□□□□□ -0.04
Hoxc8P09025 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.79□□□□□ -0.04
Hoxc8P09025 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Hoxc8P09025 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.79□□□□□ -0.04
Hoxc8P09025 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.79□□□□□ -0.04
Hoxc8P09025 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxc8P09025 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxc8P09025 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxc8P09025 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Hoxc8P09025 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hoxc8P09025 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.78□□□□□ -0.04
Hoxc8P09025 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm26927-201ENSMUST00000182385 965 ntBASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm27572-201ENSMUST00000183702 255 ntBASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxc8P09025 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm7399-201ENSMUST00000032395 858 ntBASIC14.78□□□□□ -0.04
Hoxc8P09025 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.78□□□□□ -0.04
Hoxc8P09025 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hoxc8P09025 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc8P09025 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms