Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm7488-201ENSMUST00000117148 684 ntBASIC11.78□□□□□ -0.52
Hoxa3P02831 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Hoxa3P02831 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Hoxa3P02831 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxa3P02831 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.78□□□□□ -0.52
Hoxa3P02831 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa3P02831 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa3P02831 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.78□□□□□ -0.52
Hoxa3P02831 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa3P02831 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa3P02831 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa3P02831 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa3P02831 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.77□□□□□ -0.52
Hoxa3P02831 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa3P02831 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Hoxa3P02831 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa3P02831 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa3P02831 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.77□□□□□ -0.52
Hoxa3P02831 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.77□□□□□ -0.52
Hoxa3P02831 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Hoxa3P02831 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa3P02831 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa3P02831 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hoxa3P02831 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxa3P02831 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hoxa3P02831 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hoxa3P02831 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hoxa3P02831 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxa3P02831 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hoxa3P02831 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa3P02831 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa3P02831 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Gm3436-201ENSMUST00000179930 840 ntBASIC11.76□□□□□ -0.53
Hoxa3P02831 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.76□□□□□ -0.53
Hoxa3P02831 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Gm6218-201ENSMUST00000219812 628 ntBASIC11.76□□□□□ -0.53
Hoxa3P02831 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hoxa3P02831 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa3P02831 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxa3P02831 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa3P02831 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hoxa3P02831 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms