Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.24□□□□□ -0.77
TcraP01849 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.24□□□□□ -0.77
TcraP01849 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
TcraP01849 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.24□□□□□ -0.77
TcraP01849 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.24□□□□□ -0.77
TcraP01849 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
TcraP01849 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.24□□□□□ -0.77
TcraP01849 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
TcraP01849 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
TcraP01849 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TcraP01849 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.23□□□□□ -0.77
TcraP01849 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.23□□□□□ -0.77
TcraP01849 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
TcraP01849 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
TcraP01849 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
TcraP01849 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.23□□□□□ -0.77
TcraP01849 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.23□□□□□ -0.77
TcraP01849 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
TcraP01849 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
TcraP01849 Gm21362-201ENSMUST00000194272 928 ntBASIC10.23□□□□□ -0.77
TcraP01849 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.23□□□□□ -0.77
TcraP01849 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.23□□□□□ -0.77
TcraP01849 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.23□□□□□ -0.77
TcraP01849 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
TcraP01849 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
TcraP01849 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.23□□□□□ -0.77
TcraP01849 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
TcraP01849 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
TcraP01849 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
TcraP01849 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
TcraP01849 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TcraP01849 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.22□□□□□ -0.77
TcraP01849 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
TcraP01849 Gm9726-201ENSMUST00000180321 678 ntBASIC10.22□□□□□ -0.77
TcraP01849 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
TcraP01849 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.22□□□□□ -0.77
TcraP01849 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Gm18041-201ENSMUST00000218210 618 ntBASIC10.22□□□□□ -0.77
TcraP01849 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.22□□□□□ -0.77
TcraP01849 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TcraP01849 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms