Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CcnkO88874 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
CcnkO88874 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.5□□□□□ -0.41
CcnkO88874 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.5□□□□□ -0.41
CcnkO88874 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.5□□□□□ -0.41
CcnkO88874 Gm18041-201ENSMUST00000218210 618 ntBASIC12.5□□□□□ -0.41
CcnkO88874 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CcnkO88874 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.5□□□□□ -0.41
CcnkO88874 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CcnkO88874 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CcnkO88874 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CcnkO88874 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.49□□□□□ -0.41
CcnkO88874 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.49□□□□□ -0.41
CcnkO88874 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
CcnkO88874 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CcnkO88874 Gm13597-201ENSMUST00000121239 375 ntBASIC12.49□□□□□ -0.41
CcnkO88874 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.49□□□□□ -0.41
CcnkO88874 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.49□□□□□ -0.41
CcnkO88874 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.49□□□□□ -0.41
CcnkO88874 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CcnkO88874 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.48□□□□□ -0.41
CcnkO88874 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.48□□□□□ -0.41
CcnkO88874 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CcnkO88874 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
CcnkO88874 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CcnkO88874 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CcnkO88874 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms