Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1bO88384 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1bO88384 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1bO88384 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vti1bO88384 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1bO88384 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1bO88384 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.4□□□□□ -0.26
Vti1bO88384 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1bO88384 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vti1bO88384 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vti1bO88384 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vti1bO88384 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Vti1bO88384 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vti1bO88384 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.39□□□□□ -0.27
Vti1bO88384 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vti1bO88384 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.39□□□□□ -0.27
Vti1bO88384 Mir1895-201ENSMUST00000122615 79 ntBASIC13.39□□□□□ -0.27
Vti1bO88384 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.39□□□□□ -0.27
Vti1bO88384 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
Vti1bO88384 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vti1bO88384 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.39□□□□□ -0.27
Vti1bO88384 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vti1bO88384 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.39□□□□□ -0.27
Vti1bO88384 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.39□□□□□ -0.27
Vti1bO88384 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.39□□□□□ -0.27
Vti1bO88384 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vti1bO88384 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1bO88384 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.38□□□□□ -0.27
Vti1bO88384 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Gm14822-201ENSMUST00000122247 291 ntBASIC13.38□□□□□ -0.27
Vti1bO88384 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.38□□□□□ -0.27
Vti1bO88384 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Vti1bO88384 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.38□□□□□ -0.27
Vti1bO88384 Gm2451-201ENSMUST00000199447 999 ntBASIC13.38□□□□□ -0.27
Vti1bO88384 Gm10290-201ENSMUST00000200451 999 ntBASIC13.38□□□□□ -0.27
Vti1bO88384 Gm18057-201ENSMUST00000208220 503 ntBASIC13.38□□□□□ -0.27
Vti1bO88384 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vti1bO88384 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.38□□□□□ -0.27
Vti1bO88384 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.38□□□□□ -0.27
Vti1bO88384 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.38□□□□□ -0.27
Vti1bO88384 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.38□□□□□ -0.27
Vti1bO88384 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1bO88384 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.38□□□□□ -0.27
Vti1bO88384 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vti1bO88384 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.37□□□□□ -0.27
Vti1bO88384 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vti1bO88384 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Vti1bO88384 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Vti1bO88384 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vti1bO88384 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Gm11543-201ENSMUST00000120758 370 ntBASIC13.37□□□□□ -0.27
Vti1bO88384 Gm11745-201ENSMUST00000121669 448 ntBASIC13.37□□□□□ -0.27
Vti1bO88384 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Rprl2-201ENSMUST00000157150 290 ntBASIC13.37□□□□□ -0.27
Vti1bO88384 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.37□□□□□ -0.27
Vti1bO88384 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1bO88384 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms