Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ChkaO54804 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ChkaO54804 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ChkaO54804 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ChkaO54804 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ChkaO54804 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.17□□□□□ -0.14
ChkaO54804 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.17□□□□□ -0.14
ChkaO54804 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
ChkaO54804 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.17□□□□□ -0.14
ChkaO54804 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.17□□□□□ -0.14
ChkaO54804 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ChkaO54804 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ChkaO54804 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ChkaO54804 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.16□□□□□ -0.14
ChkaO54804 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ChkaO54804 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ChkaO54804 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ChkaO54804 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ChkaO54804 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.15□□□□□ -0.14
ChkaO54804 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.15□□□□□ -0.14
ChkaO54804 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ChkaO54804 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.15□□□□□ -0.14
ChkaO54804 Gm27631-201ENSMUST00000184163 466 ntBASIC14.15□□□□□ -0.14
ChkaO54804 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.15□□□□□ -0.14
ChkaO54804 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.15□□□□□ -0.14
ChkaO54804 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ChkaO54804 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ChkaO54804 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.15□□□□□ -0.14
ChkaO54804 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.15□□□□□ -0.14
ChkaO54804 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ChkaO54804 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ChkaO54804 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ChkaO54804 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms