Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.43□□□□□ -0.1
Sdc4O35988 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sdc4O35988 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sdc4O35988 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.43□□□□□ -0.1
Sdc4O35988 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sdc4O35988 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sdc4O35988 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.42□□□□□ -0.1
Sdc4O35988 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sdc4O35988 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sdc4O35988 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.42□□□□□ -0.1
Sdc4O35988 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.42□□□□□ -0.1
Sdc4O35988 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Sdc4O35988 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Gm6912-201ENSMUST00000117218 544 ntBASIC14.42□□□□□ -0.1
Sdc4O35988 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Gm18905-201ENSMUST00000205454 928 ntBASIC14.42□□□□□ -0.1
Sdc4O35988 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sdc4O35988 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sdc4O35988 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sdc4O35988 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sdc4O35988 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.42□□□□□ -0.1
Sdc4O35988 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sdc4O35988 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sdc4O35988 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.41□□□□□ -0.1
Sdc4O35988 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.41□□□□□ -0.1
Sdc4O35988 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sdc4O35988 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Sdc4O35988 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sdc4O35988 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.41□□□□□ -0.1
Sdc4O35988 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Gm5279-201ENSMUST00000199575 745 ntBASIC14.41□□□□□ -0.1
Sdc4O35988 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.41□□□□□ -0.1
Sdc4O35988 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.41□□□□□ -0.1
Sdc4O35988 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.41□□□□□ -0.1
Sdc4O35988 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sdc4O35988 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.41□□□□□ -0.1
Sdc4O35988 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms