Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.82□□□□□ -0.2
Slc1a6O35544 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Slc1a6O35544 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.82□□□□□ -0.2
Slc1a6O35544 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.82□□□□□ -0.2
Slc1a6O35544 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Slc1a6O35544 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.82□□□□□ -0.2
Slc1a6O35544 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.82□□□□□ -0.2
Slc1a6O35544 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Slc1a6O35544 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc1a6O35544 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.81□□□□□ -0.2
Slc1a6O35544 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.81□□□□□ -0.2
Slc1a6O35544 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Gm15957-201ENSMUST00000118893 974 ntBASIC13.81□□□□□ -0.2
Slc1a6O35544 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Slc1a6O35544 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.81□□□□□ -0.2
Slc1a6O35544 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.81□□□□□ -0.2
Slc1a6O35544 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.81□□□□□ -0.2
Slc1a6O35544 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.81□□□□□ -0.2
Slc1a6O35544 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.81□□□□□ -0.2
Slc1a6O35544 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.81□□□□□ -0.2
Slc1a6O35544 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Slc1a6O35544 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Slc1a6O35544 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Slc1a6O35544 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.8□□□□□ -0.2
Slc1a6O35544 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slc1a6O35544 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slc1a6O35544 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.8□□□□□ -0.2
Slc1a6O35544 Mir5131-201ENSMUST00000175426 93 ntBASIC13.8□□□□□ -0.2
Slc1a6O35544 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.8□□□□□ -0.2
Slc1a6O35544 Gm5864-201ENSMUST00000202263 970 ntBASIC13.8□□□□□ -0.2
Slc1a6O35544 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.8□□□□□ -0.2
Slc1a6O35544 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.8□□□□□ -0.2
Slc1a6O35544 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.8□□□□□ -0.2
Slc1a6O35544 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slc1a6O35544 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Slc1a6O35544 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Slc1a6O35544 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms