Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Gm9823-201ENSMUST00000051212 327 ntBASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
B020004C17RikJ3QP07 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm15770-201ENSMUST00000117498 584 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm27501-201ENSMUST00000183599 107 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Mir8109-201ENSMUST00000184375 117 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm38266-201ENSMUST00000194931 421 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm37008-201ENSMUST00000195712 319 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm37497-201ENSMUST00000195830 798 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm42627-201ENSMUST00000197347 224 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm43118-201ENSMUST00000199149 775 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
B020004C17RikJ3QP07 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
B020004C17RikJ3QP07 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Gm43822-201ENSMUST00000200285 476 ntBASIC15.52■□□□□ 0.08
B020004C17RikJ3QP07 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms