Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Acot6-202ENSMUST00000222921 3622 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Gm6415-201ENSMUST00000118488 348 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 Dupd1-202ENSMUST00000224735 548 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.42□□□□□ -0.1
Atf6F6VAN0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Atf6F6VAN0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atf6F6VAN0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.41□□□□□ -0.1
Atf6F6VAN0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.41□□□□□ -0.1
Atf6F6VAN0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Gm14701-201ENSMUST00000117156 348 ntBASIC14.41□□□□□ -0.1
Atf6F6VAN0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.41□□□□□ -0.1
Atf6F6VAN0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Gm8396-201ENSMUST00000057361 823 ntBASIC14.41□□□□□ -0.1
Atf6F6VAN0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atf6F6VAN0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.4□□□□□ -0.1
Atf6F6VAN0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Gm8410-201ENSMUST00000117225 605 ntBASIC14.4□□□□□ -0.1
Atf6F6VAN0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atf6F6VAN0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms