Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Gm45684-201ENSMUST00000210244 1571 ntBASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85cE9Q6B2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Gm11222-201ENSMUST00000119005 738 ntBASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Mir1943-201ENSMUST00000158276 73 ntBASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Gm26315-201ENSMUST00000083890 321 ntBASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.1■□□□□ 0.33
Ccdc85cE9Q6B2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Gm11618-201ENSMUST00000117946 267 ntBASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Gm27023-201ENSMUST00000182372 285 ntBASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Gm3508-201ENSMUST00000186012 792 ntBASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Gm10109-202ENSMUST00000206890 1211 ntBASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 AC141438.2-201ENSMUST00000215068 271 ntBASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 AC135114.1-201ENSMUST00000228682 270 ntBASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85cE9Q6B2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Ccdc85cE9Q6B2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85cE9Q6B2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85cE9Q6B2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms