Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh17E9PXF0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Gm12882-201ENSMUST00000121696 517 ntBASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Gm6745-201ENSMUST00000199216 526 ntBASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh17E9PXF0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Gm18018-201ENSMUST00000198273 408 ntBASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Gm45668-201ENSMUST00000211271 493 ntBASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Gm15823-201ENSMUST00000064305 670 ntBASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh17E9PXF0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Gm37917-201ENSMUST00000194711 392 ntBASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.05□□□□□ -0.32
Pcdh17E9PXF0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms