Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm8396-201ENSMUST00000057361 823 ntBASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 BC001981-202ENSMUST00000191393 1545 ntBASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lnp1A0A1B0GSK3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Mir125a-201ENSMUST00000083545 68 ntBASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lnp1A0A1B0GSK3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm5566-201ENSMUST00000116118 459 ntBASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Gm15957-201ENSMUST00000118893 974 ntBASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lnp1A0A1B0GSK3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms