Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Gm3880A0A1B0GSB3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm13186-201ENSMUST00000118031 316 ntBASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Gm44086-201ENSMUST00000203251 2349 ntBASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Gm3880A0A1B0GSB3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC6.81□□□□□ -1.32
Gm3880A0A1B0GSB3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms